Rivilla Palma, Rafael

Proyectos de investigación

Adaptación bacteriana al ambiente rizosférico. Modelado del nodo regulador AmrZ/FleQ y diseño de comunidades sintéticas (RHIZOMODEL) PID2021-125070OB-I00.  Funding entity : Ministerio de Ciencia e innovación. From 01/09/2022 to 31/082025.  Main researchers : Marta Martín and Rafael Rivilla

Recuperación de suelos contaminados con hidrocarburos mediante consorcios bacterianos. TED2021-130996B-I00.  Funding entity : Ministerio de Ciencia e innovación. From 01/12/2022 to 30/11/2024.   Main Researchers  Miguel Redondo and Rafael Rivilla.

Adaption of Pseudomonas fluorescens to the rhizosphere environment. The AmrZ/FleQ regulatory hub. Funding entity: Ministerio de Ciencia, Innovación y Universidades RTI 2018 093991-B-I00. Participants: UAM. From 01/01/2019 to 31/12/2021. Main Researchers: M. Martín and R. Rivilla.

InteGRated systems for Effective EnvironmEntal Remediation (GREENER). Funding entity: EU2020. Participants UAM and other 20. From 1/1/2019 to 31/12/2022. Main Reseracher from UAM R. Rivilla.

Analysis of signal transduction pathways regulation in response to rhizospheric environment by Pseudomonas fluorescens F113 to improve its uses as a biological inoculant. Funding entity: MINECO. BIO2015-64480-R. Participants: UAM. From 01/01/2016 to 31/12/2018. Main Researchers: M. Martín and R. Rivilla.

Pandolfo E., Durán-Wendt D, Martínez-Cuesta R, Montoya M, Carrera-Ruiz L, Vázquez-Arias D, Blanco-Romero E, Garrido-Sanz D, Redondo-Nieto M, Martín M and Rivilla R (2024) Metagenomic and Metranscriptomic Analysis of a Bacterial Con-2 sortium for the Bioremediation of Hydrocarbon Polluted soil Microorganisms 28;14(1):105. https://doi.org/10.1186/s13568-024-01764-7

E Blanco-Romero, D Garrido-Sanz, D Durán, M Rybtke, T Tolker-Nielsen, M Redondo-Nieto, R Rivilla and M Martín. (2024) Role of extracellular matrix components in biofilm formation and adaptation of Pseudomonas ogarae F113 to the rhizosphere environment. Frontiers in Microbiology Volume 15 – 2024  https://doi.org/10.3389/fmicb.2024.1341728

Lozano-González, J.M.; Valverde, S.; Montoya, M.; Martín, M.; Rivilla, R.; Lucena, J.J.; López-Rayo, S. (2023) Evaluation of Siderophores Generated by Pseudomonas Bacteria and Their Possible Application as Fe Biofertilizers. Plants (2023), 12, 4054. https://doi.org/10.3390/plants12234054

D Durán; D. Vázquez-Arias, E Blanco-Romero, D Garrido-Sanz, M Redondo-Nieto, R Rivilla and M Martín (2023) An Orphan VrgG Auxiliary Module Related to the Type VI Secretion Systems from Pseudomonas ogarae F113 Mediates Bacterial Killing. Genes (2023) 14(11), 1979; https://doi.org/10.3390/genes14111979

R Martínez-Cuesta, R Conlon, M Wang, E Blanco-Romero, D Durán, M Redondo-Nieto, D Dowling, D Garrido-Sanz, M Martin, K Germaine and R Rivilla (2023) Field scale biodegradation of total petroleum hydrocarbons and soil restoration by Ecopiles: microbiological analysis of the process Frontiers in Microbiology (2023) https://doi.org/10.3389/fmicb.2023.1158130

E Blanco-Romero, D Durán, D Garrido-Sanz, M Redondo-Nieto, M Martín and R Rivilla (2023) Review: Adaption of Pseudomonas ogarae F113 to the Rhizosphere Environment—The AmrZ-FleQ Hub. Microorganisms (2023) 11, 1037 https://doi.org/10.3390/microorganisms11041037

E Blanco-Romero, D Garrido-Sanz, D Durán, R. Rivilla, M. Redondo-Nieto, M. Martín. (2022) Regulation of extracellular matrix components by AmrZ is mediated by c‑di‑GMP in Pseudomonas ogarae F113. Scientific Reports (2022) 12:11914 https://doi.org/10.1038/s41598-022-16162-x

E Blanco-Romero, D Garrido-Sanz, D Durán, M Martín, R Rivilla, M Redondo-Nieto (2022) Transcriptomic analysis of Pseudomonas ogarae F113 reveals the antagonistic roles of AmrZ and FleQ during rhizosphere adaption. Microb Genom 2022 DOI10.1099/mgen0.000750. https://doi.org/10.1099/mgen.0.000750

D. Garrido-Sanz, M. Redondo-Nieto, M. Martín y R. Rivilla (2021) Comparative genomics of the Pseudomonas corrugata subgroup reveals high species diversity and allows the description of Pseudomonas ogarae sp. Microb Genom 2021 Jun;7(6). https://doi.org/10.1099/mgen.0.000593

M. Wang, D. Garrido-Sanz, P. Sansegundo-Lobato, M. Redondo-Nieto,R. Conlon, M. Martín, R. Mali, X. Liu, D. N. Dowling, R. Rivilla and K. J. Germaine. (2021) Soil Microbiome Structure and Function in Ecopiles Used to Remediate Petroleum-Contaminated Soil. Front. Environ. Sci., 15 March 2021 | https://doi.org/10.3389/fenvs.2021.624070

D. Durán, P. Bernal, D. Vazquez-Arias, E. Blanco-Romero, D. Garrido-Sanz, M. Redondo-Nieto, R. Rivilla, and M..Martín. (2021) Pseudomonas fluorescens F113 type VI Secretion Systems mediate bacterial killing and adaption to the rhizosphere microbiome. Scientific Reports. https://doi.org/10.1038/s41598-021-85218-1

E. Blanco-Romero, D. Garrido-Sanz, R. Rivilla, M. Redondo-Nieto and M. Martín (2020). In Silico Characterization and Phylogenetic Distribution of Extracellular Matrix Components in the Model Rhizobacteria Pseudomonas fluorescens F113 and Other Pseudomonads. Microorganisms. https://doi.org/10.3390/microorganisms8111740

D. Garrido-Sanz, P. Sansegundo-Lobato, M. Redondo-Nieto, J. Suman, T. Cajthaml, E. Blanco-Romero, M. Martin, O. Uhlik and R. Rivilla (2020). Analysis of the biodegradative and adaptive potential of the novel polychlorinated biphenyl degrader Rhodococcus sp. WAY2 revealed by its complete genome sequence. Microbial Genomics 6(4), e000363 https://doi.org/10.1099/mgen.0.000363

D. Garrido-Sanz, M. Redondo-Nieto, M. Martín and R. Rivilla (2020). Comparative Genomics of the Rhodococcus Genus Shows Wide Distribution of Biodegradation Traits. Microorganisms 8(5), 774 https://doi.org/10.3390/microorganisms8050774